sc_Accu: Assess classifiers based on validation data

Description Usage Arguments Value

Description

Assess classifiers based on validation data

Usage

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sc_Accu(ct_scores, stVal, dLevel = "description1",
  dLevelSID = "sample_name", threshs = seq(0, 1, by = 0.005),
  nRand = 50)

Arguments

ct_scores

matrix of classification scores, rows = classifiers, columns = samples, colnames=sampleids

stVal

sample table

dLevelSID

column to indicate sample id

threshs

seq of pval cutoffs

classLevels

column name of stVal to use as ground truth to assess classifiers

Value

list of data frames with threshold


pcahan1/singleCellNet documentation built on April 9, 2021, 8:49 a.m.