makeGeneCompareTab: Make Gene Comparison Table

In pcahan1/singleCellNet: cell identity from single cell RNA-Seq data

Description

To compile an expression table for comparison

Usage

makeGeneCompareTab(queryExpTab, avgGeneTab, querySample = NULL,
  trainingCat = NULL, geneSamples)

Arguments

queryExpTab	a matrix of normalized expression query data from trans_prop
avgGeneTab	a matrix of averaged expression of training data from avgGeneCat.
querySample	a vector or string indicating the query samples
trainingCat	a vector or string indicating the categories of the training data
geneSamples	a vector or string indicating the genes of interest

Value

a matrix that combines query and training data with genes of interest for comparison

pcahan1/singleCellNet documentation built on April 9, 2021, 8:49 a.m.