sc_filterCells: find cells that pass criteria
In pcahan1/singleCellNet: cell identity from single cell RNA-Seq data
Description
Usage
Arguments
Value
Description
based purely on umis
Usage
1
sc_filterCells(sampTab, minVal = 1000, maxValQuant = 0.95)
Arguments
sampTab,
which must have UMI column
minVal
umis must exceed this
maxValQuant
quantile to select max threshold
Value
vector rownames(sampTab) meeting criteria
pcahan1/singleCellNet documentation built on April 9, 2021, 8:49 a.m.
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Description Usage Arguments Value
Description
based purely on umis
Usage
1 | sc_filterCells(sampTab, minVal = 1000, maxValQuant = 0.95)
|
Arguments
sampTab, |
which must have UMI column |
minVal |
umis must exceed this |
maxValQuant |
quantile to select max threshold |
Value
vector rownames(sampTab) meeting criteria
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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