stability_plot: Stability analysis that measures the similarity between the...
In pengminshi/MRtree: Multi-resolution Reconciled Tree
View source: R/evaluation_functions.R
stability_plot R Documentation
Stability analysis that measures the similarity between the initial flat clusterins and reconciled tree
at each resolution. Similarity can be ARI or AMRI
Description
A line plot is generated showing the similarity across resolutions, measuring the clustering stability
for each resolution
Usage
stability_plot(out, index.name = "ari")
Arguments
out
MRtree output, list containing the labelmat.mrtree and labelmat.flat
index.name
string, measurement of similarity, that can be 'ari' or 'amri'
Value
a dataframe showing the similarity per resolution
pengminshi/MRtree documentation built on March 6, 2023, 4:20 p.m.
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View source: R/evaluation_functions.R
| stability_plot | R Documentation |
Stability analysis that measures the similarity between the initial flat clusterins and reconciled tree at each resolution. Similarity can be ARI or AMRI
Description
A line plot is generated showing the similarity across resolutions, measuring the clustering stability for each resolution
Usage
stability_plot(out, index.name = "ari")
Arguments
out |
MRtree output, list containing the labelmat.mrtree and labelmat.flat |
index.name |
string, measurement of similarity, that can be 'ari' or 'amri' |
Value
a dataframe showing the similarity per resolution
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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