parseList2Dataframe: Convert list class of node info to dataframe

In ppdragondw/Key2Enrich: R package of gene set enrichment analysis

Description

Convert list class of node info to dataframe

Usage

parseList2Dataframe(nodeList, nodeDF)

Arguments

nodeList	list class of node info
nodeDF	output dataframe

Value

dataframe class of node info

Examples

path<-system.file(package = "Key2Enrich")
xmlPath<-paste(path,"/extdata",sep="")
xmlFile<-paste(xmlPath,sep="","/hsa04012.xml")
r<-parseKGMLFile(xmlFile)
kegg.nodes <- lapply(r[childIsEntry(r)], parseEntry)
nodeDF<-data.frame(KEGG_GeneID="NA",type=NA,link=NA,graphicName=NA,
                  graphicType=NA,graphicX=NA,graphicY=NA,
                  graphicWidth=NA,graphicHeight=NA)
nodeDF<-parseList2Dataframe(kegg.nodes,nodeDF)
head(nodeDF)

ppdragondw/Key2Enrich documentation built on May 29, 2019, 7:39 a.m.