protViz/prozor: Minimal Protein Set Explaining Peptide Spectrum Matches

Determine minimal protein set explaining peptide spectrum matches. Utility functions for creating fasta amino acid databases with decoys and contaminants. Peptide false discovery rate estimation for target decoy search results on psm, precursor, peptide and protein level. Computing dynamic swath window sizes based on MS1 or MS2 signal distributions.

README.md

Vignettes Man pages API and functions Files

Package details
Bioconductor views	ExperimentHubSoftware MassSpectrometry Proteomics Software
Maintainer
License	GPL-3
Version	0.3.4
URL	https://github.com/protviz/prozor
Package repository	View on GitHub
Installation	Install the latest version of this package by entering the following in R: `install.packages("remotes") remotes::install_github("protViz/prozor")`