readPeptideFasta: wrapper setting the correct parameters seqinr::read.fasta for...
In protViz/prozor: Minimal Protein Set Explaining Peptide Spectrum Matches
readPeptideFasta R Documentation
wrapper setting the correct parameters
seqinr::read.fasta for reading peptide sequences
Description
peptides which do not have protein assignment drop out
Usage
readPeptideFasta(file)
Arguments
file
- fasta file
Value
list with sequences
Examples
library(seqinr)
file = system.file("extdata/fgcz_contaminants2021_20210929.fasta.gz",package = "prozor")
fasta = readPeptideFasta(file)
protViz/prozor documentation built on Oct. 17, 2023, 6:39 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| readPeptideFasta | R Documentation |
wrapper setting the correct parameters seqinr::read.fasta for reading peptide sequences
Description
peptides which do not have protein assignment drop out
Usage
readPeptideFasta(file)
Arguments
file |
- fasta file |
Value
list with sequences
Examples
library(seqinr)
file = system.file("extdata/fgcz_contaminants2021_20210929.fasta.gz",package = "prozor")
fasta = readPeptideFasta(file)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.