protViz/prozor: Minimal Protein Set Explaining Peptide Spectrum Matches

Determine minimal protein set explaining peptide spectrum matches. Utility functions for creating fasta amino acid databases with decoys and contaminants. Peptide false discovery rate estimation for target decoy search results on psm, precursor, peptide and protein level. Computing dynamic swath window sizes based on MS1 or MS2 signal distributions.

Getting started

Package details

AuthorWitold Wolski
MaintainerWitold Wolski <wewolski@gmail.com>
LicenseGPL-3
Version0.2.14
URL https://github.com/protviz/prozor
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("protViz/prozor")
protViz/prozor documentation built on March 18, 2021, 7:48 p.m.