scripts/testids.R
In raim/ncbitax: Simple base R parser for NCBI Taxonomy
source("~/programs/ncbitax/R/taxonomy.R")
tax <- parseNCBITaxonomy("/data/taxonomy/ncbi")
getID(c("Actinobacteria","Cyanobacteria"), tax, all=FALSE)
getID(c("Actinobacteria","Cyanobacteria"), tax, all=TRUE)
getID(c("Actinobacteria","Cyanobactera"), tax, all=TRUE)
getID(c("Actinobacteria","Cyanobactera"), tax, all=FALSE)
raim/ncbitax documentation built on Aug. 6, 2020, 7:29 a.m.
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source("~/programs/ncbitax/R/taxonomy.R")
tax <- parseNCBITaxonomy("/data/taxonomy/ncbi")
getID(c("Actinobacteria","Cyanobacteria"), tax, all=FALSE)
getID(c("Actinobacteria","Cyanobacteria"), tax, all=TRUE)
getID(c("Actinobacteria","Cyanobactera"), tax, all=TRUE)
getID(c("Actinobacteria","Cyanobactera"), tax, all=FALSE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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