data2grofit: interface to package 'grofit'

Description Usage Arguments Details Author(s)

View source: R/interfaces.R

Description

data2grofit : converts platexpress data to grofit data format

Usage

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data2grofit(data, yid, min.time, max.time, wells, plate, eid, dose,
  verb = TRUE)

Arguments

data

a platexpress data set, see readPlateData

yid

data ID of the data to be converted for grofit, from data$dataIDs

min.time

minimal time of the data to be used

max.time

maximal time of the data to be used

wells

column IDs of the data set to use, if missing all wells are used

plate

plate layout map, see readPlateMap, columns of this map can be converted to grofit data annotation

eid

column IDs in the plate layout map to be used for grofit data annotation; if missing but plate is present, the columns 2 and 3 are used

dose

vector of doses in each well, used as the third column of grofit data annotation, where it can be used for dose-response calculations

verb

print messages

Details

Returns a simple list with two entries time and data, as required for grofit.

Author(s)

Rainer Machne [email protected]


raim/platexpress documentation built on Nov. 9, 2018, 5:38 p.m.