interpolatePlateTimes: Interpolate to Common Timepoints

Description Usage Arguments Value Author(s)

View source: R/platereader.R

Description

interpolates all time-series of a plate to an average master time, using the R base function spline. An average time is calculated for each measurement point and all values are interpolated to these new time points. This is automatically done when parsing the raw data with readPlateData, unless explicitly suppressed. The same is also done for well temperatures.

Usage

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interpolatePlateTimes(data, time.range = c("common", "full"),
  spline.method = "natural", verb = TRUE)

Arguments

data

platexpress data, see readPlateData

time.range

"common" requires that all data must have the same number of time-points, "full" interpolates the maximal available time range, using the mean time step of the mean of data-specific time vectors omega

spline.method

the "method" argument used in stats::spline for interpolation

verb

print messages if true

Value

returns a copy of the full data list with a master time and temperature added at the top level

Author(s)

Rainer Machne [email protected]


raim/platexpress documentation built on Jan. 10, 2019, 12:14 p.m.