dpseg_plate: Call 'dpseg' for selected wells.
In raim/platexpress: Inspection and Analysis of Microbial Growth and Gene Expression Data
Description
The algorithm in dpseg splits curves
into linear segments. If the passed data is a biomass measure
(eg. OD), and option log=TRUE the slopes correspond to local
growth rate (per time unit).
Usage
1
dpseg_plate(data, yid = "OD", wells, log = TRUE, xid, verb = 0, ...)
Arguments
data
platexpress data object
yid
ID of the platexpress data to use
wells
subset and plot order of wells
log
use ln of the data
xid
x-axis data ID in platexpress data
verb
progress messages
...
arguments passed to dpseg
raim/platexpress documentation built on Jan. 18, 2022, 1:41 p.m.
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Description
The algorithm in dpseg splits curves
into linear segments. If the passed data is a biomass measure
(eg. OD), and option log=TRUE the slopes correspond to local
growth rate (per time unit).
Usage
1 | dpseg_plate(data, yid = "OD", wells, log = TRUE, xid, verb = 0, ...)
|
Arguments
data |
|
yid |
ID of the |
wells |
subset and plot order of wells |
log |
use ln of the data |
xid |
x-axis data ID in |
verb |
progress messages |
... |
arguments passed to |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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