reference_specimen_type: Laboratory specimen type reference table (SNOMED CT concepts)

In ramses-antibiotics/ramses-package: R Package for Antimicrobial Stewardship & Surveillance

Laboratory specimen type reference table (SNOMED CT concepts)

Description

This reference table contains the list of admissible specimen types in microbiology records (see validate_microbiology()). These concepts are from the https://browser.ihtsdotools.org/ and correspond to the descendants of the 123038009 | Specimen (specimen) | concept.

Usage

reference_specimen_type

Format

A data frame.

Details

This data frame contains 5 variables:

conceptId

SNOMED CT concept code

moduleId

SNOMED CT module code

fsn_term

SNOMED CT Full Specified Name

pt_term

SNOMED CT Preferred Term

snomed_release_version

SNOMED CT RF2 release date

Examples

data("reference_specimen_type")
head(reference_specimen_type)

ramses-antibiotics/ramses-package documentation built on Feb. 13, 2024, 1:01 p.m.