TherapyEpisode: An S4 class to represent episodes of antimicrobial therapy

In ramses-antibiotics/ramses-package: R Package for Antimicrobial Stewardship & Surveillance

An S4 class to represent episodes of antimicrobial therapy

Description

An S4 class to represent episodes of antimicrobial therapy

Usage

TherapyEpisode(...)

TherapyEpisode.DBIConnection(conn, id, extend_table_start = NULL)

TherapyEpisode.MedicationRequest(x, extend_table_start = NULL)

Arguments

...	generic signature
conn	a database connection
id	a vector of one or several therapy episode identifiers (from database field drug_therapy_episodes.therapy_id as generated by load_medications() or create_therapy_episodes())
extend_table_start	optional integer to specify an earlier start (in hours) in the longitudinal table of the object. For example, a value of 6 means the longitudinal table will begin 6 hours prior to the start of antimicrobial therapy. The value must be a positive number. Decimal numbers will be rounded up to the nearest integer. The default is NULL.
x	an object of class MedicationRequest

Slots

id

a therapy episode identifier

conn

a database connection

record

a tbl_sql for the corresponding database record

longitudinal_table

a tbl_sql for the longitudinal therapy table

ramses-antibiotics/ramses-package documentation built on Feb. 13, 2024, 1:01 p.m.