pf.groupsTospecies: Converts integer-indexed groups to species-labelled groups in...
In reptalex/phylofactor: phylofactor
View source: R/pf.groupsTospecies.R
pf.groupsTospecies R Documentation
Converts integer-indexed groups to species-labelled groups in phylofactor object
Description
Converts integer-indexed groups to species-labelled groups in phylofactor object
Usage
pf.groupsTospecies(pf)
Arguments
pf
phylofactor class object from PhyloFactor, twoSampleFactor or gpf
Examples
library(phylofactor)
data(FTmicrobiome)
pf <- FTmicrobiome$PF
species.groups <- pf.groupsTospecies(pf)
pf$factors[1:3,]
#the otuIDs/species in factor 3, Group1 are:
species.groups[[3]][[1]]
reptalex/phylofactor documentation built on Feb. 28, 2024, 3:19 p.m.
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View source: R/pf.groupsTospecies.R
| pf.groupsTospecies | R Documentation |
Converts integer-indexed groups to species-labelled groups in phylofactor object
Description
Converts integer-indexed groups to species-labelled groups in phylofactor object
Usage
pf.groupsTospecies(pf)
Arguments
pf |
phylofactor class object from |
Examples
library(phylofactor)
data(FTmicrobiome)
pf <- FTmicrobiome$PF
species.groups <- pf.groupsTospecies(pf)
pf$factors[1:3,]
#the otuIDs/species in factor 3, Group1 are:
species.groups[[3]][[1]]
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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