API for reptalex/phylofactor
phylofactor

Global functions
ColorTaxa Man page Source code
FTmicrobiome Man page
GAM Man page Source code
HGTplot Man page Source code
OTUtoTaxa Man page Source code
PhyCA Man page Source code
PhyloFactor Man page Source code
PhyloRegression Man page Source code
TaxaSplit Man page Source code
VAR Man page Source code
amalg.ILR Man page Source code
binPhyloPlot Man page Source code
binTaxa Man page Source code
bins Man page Source code
checkData Man page Source code
clo Man page Source code
compData Man page Source code
crossVmap Man page Source code
decideMethod Man page Source code
extractEdges Man page Source code
find.unsplit.Grps Man page Source code
findInterruptions Man page Source code
findWinner Man page Source code
gMean Man page Source code
getAssignedGroups Man page Source code
getFactoredEdges Man page Source code
getFactoredEdgesPAR Man page Source code
getLabelledGrp Man page Source code
getNewGroups Man page Source code
getObjective Man page Source code
getPhyloGroups Man page Source code
getStats Man page Source code
gpf Man page Source code
ilrInv Man page Source code
ilrvec Man page Source code
listTaxa Man page Source code
logData Man page Source code
mAggregation Man page Source code
matrix.to.phyloframe Man page Source code
pf.BINprojection Man page Source code
pf.ILRprojection Man page Source code
pf.flow Man page Source code
pf.getPhyloGroups Man page Source code
pf.groupsTospecies Man page Source code
pf.nullsim Man page Source code
pf.plot Man page Source code
pf.predict Man page Source code
pf.summary Man page Source code
pf.taxa Man page Source code
pf.tidy Man page Source code
pf.tree Man page Source code
pglm Man page Source code
phyca.tidy Man page Source code
phyloFcluster Man page Source code
phyloFrame Man page Source code
phylobin Man page Source code
phyloframe.to.matrix Man page Source code
pvDeviance Man page Source code
replaceZeros Man page Source code
simHGT Man page Source code
trimTree Man page Source code
twoSampleFactor Man page Source code
uniqueTaxa Man page Source code
updateBinList Man page Source code
updateTreeList Man page Source code
whichBinSplit Man page Source code
reptalex/phylofactor documentation built on Jan. 21, 2018, 9 p.m.