permutation_thres: Calculate the positive and negative thresholds based on the...
In ressomlab/INDEED: Interactive Visualization of Integrated Differential Expression and Differential Network Analysis for Biomarker Candidate Selection
View source: R/helper_function.R
permutation_thres R Documentation
Calculate the positive and negative thresholds based on the permutation result
Description
This function calculates the positive and negative thresholds based on the
permutation result.
Usage
permutation_thres(thres_left, thres_right, p, diff_p)
Arguments
thres_left
This is the threshold representing 2.5 percent of the left tail of the
empirical distributuion curve.
thres_right
This is the threshold representing 2.5 percent of the right tail of the
empirical distributuion curve.
p
This is the number of biomarker candidates.
diff_p
This is the permutation result from either permutation_cor or permutation_pc.
Value
A list of positive and negative thresholds.
ressomlab/INDEED documentation built on Aug. 3, 2022, 4:45 p.m.
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View source: R/helper_function.R
| permutation_thres | R Documentation |
Calculate the positive and negative thresholds based on the permutation result
Description
This function calculates the positive and negative thresholds based on the permutation result.
Usage
permutation_thres(thres_left, thres_right, p, diff_p)
Arguments
thres_left |
This is the threshold representing 2.5 percent of the left tail of the empirical distributuion curve. |
thres_right |
This is the threshold representing 2.5 percent of the right tail of the empirical distributuion curve. |
p |
This is the number of biomarker candidates. |
diff_p |
This is the permutation result from either permutation_cor or permutation_pc. |
Value
A list of positive and negative thresholds.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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