Q_ploidevol: Calculates Q-matrix for Ploidevol model

Description Usage Arguments Details Value

View source: R/Q_ploidevol.R

Description

Calculates Q-matrix for Ploidevol model

Usage

1
Q_ploidevol(log.theta)

Arguments

log.theta

vector of size 6 with ln values of parameters (alpha, beta, delta, epsilon, rho, omega)

Details

This function specifies a Q-matrix of size 11x11 where states are ploidy values from 2x to 12x

Value

Q a sparse matrix of size 11x11


roszenil/chromploid documentation built on March 19, 2018, 4:42 p.m.