chromploid_sim.char: Simulates a a sample of chromosome number or ploidy change...

In roszenil/chromploid: Chromosome Number and Ploidy Evolution Models

Description

Simulates a a sample of chromosome number or ploidy change for models with large sparse matrices

Usage

For BiChroM simulation sim.char(phy=mytree, par=Q_bichrom, nsim=1, model="discrete", root=56)

Arguments

phy	Bifurcating phylogenetic tree
par	Q-matrix model to be used
nsim	number of simulations by default nsim=1
model	by default model="discrete" for other usage see geiger:::sim.char
root	discrete value at the root, by default 1

roszenil/chromploid documentation built on May 27, 2019, 11:42 p.m.