chromploid_sim.char: Simulates a a sample of chromosome number or ploidy change...

Description Usage Arguments

View source: R/chromploid_sim.char.R

Description

Simulates a a sample of chromosome number or ploidy change for models with large sparse matrices

Usage

1
For BiChroM simulation sim.char(phy=mytree, par=Q_bichrom, nsim=1, model="discrete", root=56)

Arguments

phy

Bifurcating phylogenetic tree

par

Q-matrix model to be used

nsim

number of simulations by default nsim=1

model

by default model="discrete" for other usage see geiger:::sim.char

root

discrete value at the root, by default 1


roszenil/chromploid documentation built on March 19, 2018, 4:42 p.m.