export_csv: Exports the flow cytometric fingerprint or raw data to CSV.

In rprops/Phenoflow_package: Advanced analysis of microbial flow cytometry data

Description

This function exports the fingerprint to a single CSV file or the fcs file associated with a flowFrame object to a CSV file .

Usage

export_csv(x, location = "./")

Arguments

x	flowCore::flowFrame or flowFDA::flowBasis object
location	absolute or relative path to where the resulting csv files are written to. If it does not exist, it will be created (provided the user has write persmissions in that directory). Defaults to working directory.

Examples

data(CoolingTower)
data(flowData)
### show class info to see if flowSet (collection of flowFrames) or flowBasis
class(flowData)
###  Export csv files of the raw data
fsApply(flowData,export_csv,location="./raw_csv/")
###  Export csv files of the fingerprint
export_csv(CoolingTower,location="./fingerprint/")

rprops/Phenoflow_package documentation built on Sept. 22, 2020, 5:43 p.m.