Description Usage Arguments Examples
View source: R/time_discretization.R
This function subsets the input frames based on analysis time. Developped for analysis of on-line time series data.
1 2 3 4 5 6 7 8 9 10 | time_discretization(
x,
analysis.length,
create = FALSE,
start = 0,
time.interval,
height = c(0, 200),
trigger = "FL1-H",
time.step = 0.1
)
|
x |
flowSet of FCM data |
analysis.length |
Dataframe with $time defining the total analysis time for each sample |
create |
Do you want to make a new folder for the new flowframes? Defaults to FALSE. |
start |
Vector of length n(x) that indicates for each sample at what time point it should start discretisizing. (e.g., first 10 minutes are irrelevant, start = 10*60) |
time.interval |
Bin size of each new FCS file. For example, time.interval = 10 will make new FCS files of 10 second intervals. |
height |
Bottom and top of the time window utilized (use minimum and maximum parameter intensity). Default on c(0,200) |
trigger |
Primary parameter of signal detection (e.g. FL1-H for SYBR Green). This is used to construct the binning window with the height parameter. |
time.step |
discrete unit of time used in the FCS files (FCS files don't register in seconds). This value is used to transform the discrete time units into seconds. |
1 | # To be added in the near future
|
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