TrioSetList: Constructor for 'TrioSetList' class

In rscharpf/MinimumDistance: A Package for De Novo CNV Detection in Case-Parent Trios

Description

The TrioSetList class has been deprecated and may be removed in a future release. Use MinDistExperiment instead.

Usage

TrioSetList(chromosome = integer(), pedigreeData = Pedigree(),
  sample.sheet, row.names = NULL, lrr, baf, featureData, cdfname,
  ffname = "", genome)

Arguments

chromosome	integer vector of chromosome names
pedigreeData	a Pedigree object
sample.sheet	a data.frame containing sample covariates
row.names	a character vector
lrr	a matrix of log R ratios
baf	a matrix of B allele frequencies
featureData	a GenomeAnnotatedDataFrame
cdfname	a character string indicating the annotation package
ffname	prefix for ff-filenames
genome	character string indicating genome build

rscharpf/MinimumDistance documentation built on Sept. 16, 2019, 4:12 a.m.