MinDistGRanges-class: A container for storing segmentation data for members in a...

In rscharpf/MinimumDistance: A Package for De Novo CNV Detection in Case-Parent Trios

Description

A container for storing segmentation data for members in a ParentOffspring family

Usage

## S4 method for signature 'MinDistGRanges'
names(x)

## S4 method for signature 'MinDistGRanges'
mindist(object)

## S4 replacement method for signature 'MinDistGRanges,GRangesList'
mindist(object) <- value

## S4 method for signature 'MinDistGRanges'
offspring(object)

## S4 method for signature 'MinDistGRanges'
mother(object)

## S4 method for signature 'MinDistGRanges'
father(object)

## S4 method for signature 'MinDistGRanges'
pedigree(object)

## S4 method for signature 'MinDistGRanges'
show(object)

## S4 method for signature 'GRangesList'
offspring(object)

Arguments

x	a MinDistGRanges object
object	a MinDistGRanges object
value	a GRangesList object

Slots

mindist

a GRangesList object

offspring

a GRangesList object

father

a GRanges object

mother

a GRanges object

pedigree

a ParentOffspring object

Examples

data(md_gr)
offspring(md_gr)
father(md_gr)
mother(md_gr)
mindist(md_gr)

rscharpf/MinimumDistance documentation built on Sept. 16, 2019, 4:12 a.m.