PGDspideR: Execute PGDspider data format conversions in R

In rystanley/genepopedit: Simple and flexible manipulation of genomic data

Execute PGDspider data format conversions in R

Description

Function to between file types in R.

Usage

PGDspideR(input, input_format, output, output_format, spid,
  where.pgdspider)

Arguments

input	the full path to the input file.
input_format	what are you converting from (e.g. GENEPOP or PED) these must match the dropdown menus in pgdSpider.
output	the full file path to the desired output. (e.g. GENEPOP or PED) these must match the dropdown menus in pgdSpider.
output_format	what are you converting to (e.g. GENEPOP or PED). This must match the dropdown menus in pgdSpider.
spid	the fill file path to the spid file generated in PGDspider.
where.pgdspider	A file path to the PGDspider installation folder.

rystanley/genepopedit documentation built on June 27, 2023, 11:33 p.m.