View source: R/genepop_assigner.R
genepop_assigner | R Documentation |
Function to convert Genepop to assigner
genepop_assigner(genepop, popgroup = NULL, path = NULL)
genepop |
the genepop data to be manipulated. This can be either a file path or a dataframe read in with tab separation, header=FALSE , quote="", and stringsAsFactors=FALSE. This will be the standard genepop format with a the first n+1 rows corresponding to the n loci names, or a single comma delimited row of loci names followed by the locus data. Populations are separated by "Pop". Each individual ID is linked to the locus data by " , " (space,space space) and is read in as as a single row (character). |
popgroup |
if specified (Default: NULL) popgroup is a dataframe or path to a csv. This dataframe contains two columns. Column 1 corresponds to the population names. These names should match the individual IDs (e.g. BON_01 , 110110 would be 'BON'). The next column has the group. These values must be numeric. If groupings are the same as populations then leave as NULL (Default). |
path |
the filepath and filename of output. |
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