genepop_hzar: Convert Genepop to HZAR format.

In rystanley/genepopedit: Simple and flexible manipulation of genomic data

Convert Genepop to HZAR format.

Description

Function to convert Genepop to the R package HZAR.

Usage

genepop_hzar(genepop, distances, path)

Arguments

genepop	the genepop data to be manipulated. This can be either a file path or a dataframe read in with tab separation, header=FALSE , quote="", and stringsAsFactors=FALSE. This will be the standard genepop format with the first n+1 rows corresponding to the n loci names, or a single comma delimited row of loci names followed by the locus data. Populations are separated by "Pop". Each individual ID is linked to the locus data by " , " (space,space space) and is read in as as a single row (character).
distances	A dataframe or path to a text file with your distances between populations. Should contain 2 columns - Populations and Distances.There should be the same number of populations as in the Genepop file.
path	the filepath and filename of output.

rystanley/genepopedit documentation built on June 27, 2023, 11:33 p.m.