View source: R/genepop_gsisim.R
genepop_GSIsim | R Documentation |
Covert from GENEPOP to format required by gsi_sim. Note that output has SampleIDs formated as Population_Population_ID instead of conventioanl Population_ID to fit commong sampleID naming approach of genepopedit into the convention of gsi_sim.
genepop_GSIsim(genepop, path)
genepop |
the genepop data to be manipulated. This can be either a file path or a dataframe read in with tab separation, header=FALSE , quote="", and stringsAsFactors=FALSE. This will be the standard genepop format with the first n+1 rows corresponding to the n loci names, or a single comma delimited row of loci names followed by the locus data. Populations are separated by "Pop". Each individual ID is linked to the locus data by " , " (space, space space) and is read in as as a single row (character). |
path |
the filepath and filename of output. |
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