chalmers_gem_id_type: Metabolite identifier type label used in Chalmers Sysbio GEM

chalmers_gem_id_typeR Documentation

Metabolite identifier type label used in Chalmers Sysbio GEM

Description

Metabolite identifier type label used in Chalmers Sysbio GEM

Usage

chalmers_gem_id_type(label)

Arguments

label

Character: an ID type label, as shown in the table at translate_ids

Value

Character: the Chalmers GEM specific ID type label, or the input unchanged if it could not be translated (still might be a valid identifier name). These labels should be column names from the "metabolites.tsv" distributed with the GEMs.

See Also

  • hmdb_id_type

  • uniprot_id_type

  • ensembl_id_type

  • uploadlists_id_type

Examples

chalmers_gem_id_type("metabolicatlas")
# [1] "metsNoComp"


saezlab/OmnipathR documentation built on Nov. 10, 2024, 11:02 p.m.