enzsub_graph: Enzyme-substrate graph

View source: R/graph.R

enzsub_graphR Documentation

Enzyme-substrate graph

Description

Transforms the a data frame with enzyme-substrate relationships (obtained by enzyme_substrate) to an igraph graph object.

Usage

enzsub_graph(enzsub)

Arguments

enzsub

Data frame created by enzyme_substrate

Value

An igraph directed graph object.

See Also

  • enzyme_substrate

  • giant_component

  • find_all_paths

Examples

enzsub <- enzyme_substrate(resources = c('PhosphoSite', 'SIGNOR'))
enzsub_g <- enzsub_graph(enzsub = enzsub)


saezlab/OmnipathR documentation built on Sept. 7, 2024, 4:12 p.m.