database_summary: Summary of the annotations and intercell database contents

In saezlab/OmnipathR: OmniPath web service client and more

Summary of the annotations and intercell database contents

Description

The 'annotations_summary' and 'intercell_summary' query types return detailed information on the contents of these databases. It includes all the available resources, fields and values in the database.

Usage

database_summary(query_type, return_df = FALSE)

Arguments

query_type	Character: either "annotations" or "intercell".
return_df	Logical: return a data frame instead of list.

Value

Summary of the database contents: the available resources, fields, and their possible values. As a nested list if format is "json", otherwise a data frame.

Examples

annotations_summary <- database_summary('annotations')

saezlab/OmnipathR documentation built on April 28, 2024, 2:16 a.m.