plotAvgCT: plotAvgCT

In sccallahan/WARPqpcr: Web App and R Package for qPCR

Description

Generates a barplot of the average CT values for each sample with error bars.

Usage

plotAvgCT(avgCtObj, palette = "Set1", xlab = "", ylab = "",
  title = "", legend.title = "", theme_classic = TRUE)

Arguments

avgCtObj	A data.frame generated from the getAvgCT function.
palette	Any color palette from RColorBrewer.
xlab	x axis label.
ylab	y axis label.
title	Main title for the plot.
legend.title	Title for the plot legend.
theme_classic	Boolean value. TRUE will yield a plot with the 'classic' background. FALSE will yield a plot with the default ggplot2 theme.

Value

A ggplot2 barplot of average CT values.

sccallahan/WARPqpcr documentation built on March 1, 2020, 1:23 a.m.