consistentPeak-MeRIP.Peak-method: consistentPeak

In scottzijiezhang/MeRIPtools: Analyze MeRIP-seq data and QTL calling

Description

consistentPeak

Usage

## S4 method for signature 'MeRIP.Peak'
consistentPeak(object, samplenames = NULL,
  joint_threshold = NA, threads = 1)

Arguments

object	The MeRIP.Peak object contain peak calling result.
samplenames	The samplenames to be reported for consistent peaks.
joint_threshold	Define the number of sample required to have consistent peak in a locus to call consistent peak in a group.
threads	The number of threads to use.

Value

Peak consistent across specified samples at specified joint_threshod. If joint_threshold not specified, report consistent peaks across all samples specified. If no sample specified, report consistent peak across all samples.

scottzijiezhang/MeRIPtools documentation built on March 27, 2021, 3:04 a.m.