plotMetaGeneMulti: plotMEtaGeneMulti A wrapper function for Guitar to plot meta...
In scottzijiezhang/MeRIPtools: Analyze MeRIP-seq data and QTL calling
Description
plotMEtaGeneMulti A wrapper function for Guitar to plot meta gene plot of multiple samples overlaid on each other.
Usage
1
2
plotMetaGeneMulti(peakList, gtf, saveToPDFprefix = NA,
includeNeighborDNA = FALSE)
Arguments
peakList
The list of peak, each object of list should have a data frame of peak in bed12 format.
gtf
The annotation file for the gene model.
saveToPDFprefix
Set a name to save the plot to PDF.
includeNeighborDNA
Whether to include upstrean and downstream region in the meta gene.
scottzijiezhang/MeRIPtools documentation built on March 27, 2021, 3:04 a.m.
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Description
plotMEtaGeneMulti A wrapper function for Guitar to plot meta gene plot of multiple samples overlaid on each other.
Usage
1 2 | plotMetaGeneMulti(peakList, gtf, saveToPDFprefix = NA,
includeNeighborDNA = FALSE)
|
Arguments
peakList |
The list of peak, each object of list should have a data frame of peak in bed12 format. |
gtf |
The annotation file for the gene model. |
saveToPDFprefix |
Set a name to save the plot to PDF. |
includeNeighborDNA |
Whether to include upstrean and downstream region in the meta gene. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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