Files in scottzijiezhang/MeRIPtools
Analyze MeRIP-seq data and QTL calling

.Rbuildignore
.gitignore
DESCRIPTION
MeRIPtools.Rproj
NAMESPACE
R/AllGenerics.R R/Guitar_functions.R R/MeRIP_class.R R/PlotGene.R R/QTL_PoissonGamma.R R/QTL_betaBinomial.R R/QTL_betaBinomial.neg.R R/RcppExports.R R/countReads.R R/countReadsFromBam.R R/gtfToGeneModel.R R/initialization.R R/methods.R R/plotGeneCov.R R/plotMetaGene.R R/plotPCA.DESeq2.R R/qqplot.pvalue.R R/randomPeak.R README.md man/BetaBinTest.Rd man/GuitarPlotNew.Rd man/IP.files.Rd man/Input.files.Rd man/MetaGene.Rd man/PrepCoveragePlot-MeRIP.Peak-method.Rd man/QNBtest.Rd man/QTL_BetaBin.Rd man/QTL_BetaBin2.Rd man/QTL_BetaBin_permute.Rd man/QTL_PoissonGamma.Rd man/RADARtest.Rd man/adjustExprLevel-MeRIP.Peak-method.Rd man/annotatePeak-MeRIP.Peak-method.Rd man/callPeakBinomial.Rd man/callPeakFisher.Rd man/consistentPeak-MeRIP.Peak-method.Rd man/countReads.Rd man/counts.Rd man/dot-Bino_test.Rd man/geneBins-MeRIP-method.Rd man/geneExpression-MeRIP.Peak-method.Rd man/geneExpression.Rd man/geneExpressionTMP.Rd man/gtfToGeneModel.Rd man/jointPeakCount.Rd man/normalizeLibrary-MeRIP.Peak-method.Rd man/peakDistribution.Rd man/plotGene.Rd man/plotGeneCov-MeRIP.Peak-method.Rd man/plotGeneCoverage.Rd man/plotGeneMonster.Rd man/plotGenePair.Rd man/plotMetaGene.Rd man/plotMetaGeneMulti.Rd man/plotPCAfromMatrix.Rd man/plotTPM.Rd man/qqplot.pvalue.Rd man/reportJointPeak.Rd man/results.Rd man/select.Rd man/swapChr22.QTL_BetaBin.Rd man/swapChr22.QTL_BetaBin.permute.Rd
src/.PoissonGamma.cpp.swp
src/.gitignore
src/Makevars
src/PoissonGamma.cpp
src/RcppExports.cpp
scottzijiezhang/MeRIPtools documentation built on Nov. 5, 2019, 8:46 a.m.