plotPCAfromMatrix: plotPCAfromMatrix
In scottzijiezhang/MeRIPtools: Analyze MeRIP-seq data and QTL calling
View source: R/plotPCA.DESeq2.R
Description
plotPCAfromMatrix
Usage
1
plotPCAfromMatrix(m, group, standardize = TRUE, loglink = TRUE)
Arguments
m
The matrix of count data
group
The factor levels to color the samples. Should be the save number as the # of matrix columns
standardize
Logic parameter indicating whether to standardize the count data to have unit variance. The default is TRUE.
loglink
Logic parameter determine whether to take log of the metrix data. Default is TRUE. If your input matrix is at log scale, use FALSE.
scottzijiezhang/MeRIPtools documentation built on March 27, 2021, 3:04 a.m.
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View source: R/plotPCA.DESeq2.R
Description
plotPCAfromMatrix
Usage
1 | plotPCAfromMatrix(m, group, standardize = TRUE, loglink = TRUE)
|
Arguments
m |
The matrix of count data |
group |
The factor levels to color the samples. Should be the save number as the # of matrix columns |
standardize |
Logic parameter indicating whether to standardize the count data to have unit variance. The default is TRUE. |
loglink |
Logic parameter determine whether to take log of the metrix data. Default is TRUE. If your input matrix is at log scale, use FALSE. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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