summarize_kinetic_parameters: Summarize kinetic parameters
In shackett/simmer: Systematic Identification of Meaningful Metabolic Enzyme Regulation
Description
Usage
Arguments
Value
Description
# based on metabolites and enzyme data provided, determine the kinetic constants that are present in the reaction equations from format_raw_equations
Usage
1
2
summarize_kinetic_parameters(rxnSummary, rxnEquations,
kinetically_differing_isoenzymes)
Arguments
rxnSummary
a list containing a reaction equation to fit (several forms of it) and multi-omic data
rxnEquations
expressions for reaction equations
kinetically_differing_isoenzymes
True-False: does only one equation exist for the reaction (false)
or are are reaction equations isoenzyme specific (true)
Value
writes summary of kinetic parameter table (kineticPars) and types of all reaciton species (all_species)
to global environment
shackett/simmer documentation built on May 29, 2019, 8:06 p.m.
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Description Usage Arguments Value
Description
# based on metabolites and enzyme data provided, determine the kinetic constants that are present in the reaction equations from format_raw_equations
Usage
1 2 | summarize_kinetic_parameters(rxnSummary, rxnEquations,
kinetically_differing_isoenzymes)
|
Arguments
rxnSummary |
a list containing a reaction equation to fit (several forms of it) and multi-omic data |
rxnEquations |
expressions for reaction equations |
kinetically_differing_isoenzymes |
True-False: does only one equation exist for the reaction (false) or are are reaction equations isoenzyme specific (true) |
Value
writes summary of kinetic parameter table (kineticPars) and types of all reaciton species (all_species) to global environment
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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