API for shangll123/SpatialPCA
Spatially Aware Dimension Reduction for Spatial Transcriptomics
| Global functions | |
|---|---|
| .make_subspot_coldata | Source code |
| .make_subspot_offsets | Source code |
| CreateSpatialPCAObject | Man page Source code |
| F_funct_sameG | Source code |
| Spatial-package | Man page |
| SpatialPCA | Man page |
| SpatialPCA-class | Man page |
| SpatialPCA_EstimateLoading | Man page Source code |
| SpatialPCA_Multiple_Sample | Man page Source code |
| SpatialPCA_SpatialPCs | Man page Source code |
| SpatialPCA_buildKernel | Man page Source code |
| SpatialPCA_estimate_parameter | Source code |
| SpatialPCA_expr_pred | Man page Source code |
| SpatialPCA_highresolution | Man page Source code |
| bandwidth_select | Man page |
| fx_1NN | Source code |
| fx_CHAOS | Man page Source code |
| fx_PAS | Man page Source code |
| fx_kNN | Source code |
| get_NMF | Man page Source code |
| get_PCA | Man page Source code |
| kernel_build | Man page |
| kernel_build_sparse | Man page Source code |
| louvain_clustering | Man page Source code |
| plot_RGB_UMAP | Man page Source code |
| plot_RGB_tSNE | Man page Source code |
| plot_cluster | Man page Source code |
| plot_each_cluster | Man page |
| plot_factor_value | Man page Source code |
| plot_trajectory | Man page Source code |
| refine_cluster_10x | Man page Source code |
| spark | Source code |
| walktrap_clustering | Man page Source code |
