Files in shangll123/SpatialPCA

Spatially Aware Dimension Reduction for Spatial Transcriptomics

R/SpatialPCA-package.R R/SpatialPCA.R R/SpatialPCA_EstimateLoading.R R/SpatialPCA_SpatialPCs.R R/SpatialPCA_buildKernel.R R/SpatialPCA_highresolution.R R/SpatialPCA_multiple_sample.R R/SpatialPCA_utilties.R README.md man/CreateSpatialPCAObject.Rd man/Spatial-package.Rd man/SpatialPCA-class.Rd man/SpatialPCA_EstimateLoading.Rd man/SpatialPCA_Multiple_Sample.Rd man/SpatialPCA_SpatialPCs.Rd man/SpatialPCA_buildKernel.Rd man/SpatialPCA_expr_pred.Rd man/SpatialPCA_highresolution.Rd man/bandwidth_select.Rd man/fx_CHAOS.Rd man/fx_PAS.Rd man/get_NMF.Rd man/get_PCA.Rd man/kernel_build.Rd man/kernel_build_sparse.Rd man/louvain_clustering.Rd man/plot_RGB_UMAP.Rd man/plot_RGB_tSNE.Rd man/plot_cluster.Rd man/plot_each_cluster.Rd man/plot_factor_value.Rd man/plot_trajectory.Rd man/refine_cluster_10x.Rd man/walktrap_clustering.Rd