BI_ensemblGoEnrich: Go annotation based on lucky::ensemblGo

In shijianasdf/BasicBioinformaticsAnalysisFromZhongShan: Launch Usual Clinical tool for Kind Yield

Description

ensemblGoEnrich help do a simple Go annotation for given genes based on ensemblGo

Usage

  ensemblGoEnrich(genes,
                  parallel = F,
                  save.file = F,
                  names = "love")

Arguments

genes	a character/factor vector of genes
parallel	whether use parallel strategy to accelerate the process
save.file	whether save the data
names	part of saved file name

Note

Internet must be available for work

Author(s)

Weibin Huang<[e-mail]>

See Also

lucky::ensemblGo

Examples

## test dataset
test <- common.annot$ENSEMBL;genes <- test[1:1000]

## Go enrich annotation
system.time(
  b <- ensemblGoEnrich(genes,parallel = F)
)

## View the result
View(b$merge)
View(b$metadata)

shijianasdf/BasicBioinformaticsAnalysisFromZhongShan documentation built on Jan. 3, 2020, 10:08 p.m.