BeforeWGCNA: Before WGCNA
In shijianasdf/BasicBioinformaticsAnalysisFromZhongShan: Launch Usual Clinical tool for Kind Yield
Description
Usage
Arguments
Author(s)
Description
Test the number of genes selected in WGCNA
Usage
1
2
BeforeWGCNA(expr.matrix, design, log.convert = T, mad.portion = 0.75,
mad.min = 0.01)
Arguments
expr.matrix
expression matrix
design
a design object
log.convert
whether do log2 scale for expression matrix
mad.portion
a portion of data you want base on median absolute deviation(mad) filter
mad.min
the lower cut-off of mad filter
Author(s)
Weibin Huang<654751191@qq.com>
shijianasdf/BasicBioinformaticsAnalysisFromZhongShan documentation built on Jan. 3, 2020, 10:08 p.m.
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Description Usage Arguments Author(s)
Description
Test the number of genes selected in WGCNA
Usage
1 2 | BeforeWGCNA(expr.matrix, design, log.convert = T, mad.portion = 0.75,
mad.min = 0.01)
|
Arguments
expr.matrix |
expression matrix |
design |
a design object |
log.convert |
whether do log2 scale for expression matrix |
mad.portion |
a portion of data you want base on median absolute deviation(mad) filter |
mad.min |
the lower cut-off of mad filter |
Author(s)
Weibin Huang<654751191@qq.com>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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