Description Usage Arguments Value Author(s) Examples
View source: R/transcript_count.R
Counts the number of significant transcripts of the same gene
1 | transcript_count(result, annotations, typeID = "ensembl_gene_id")
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result |
A matrix of data. Columns = samples, rows = genes,transcripts,CpG... |
annotations |
The design of the experiment (object) |
typeID |
typeID The type of ID used, e.g. |
Linear model contrast ...
Simon J Pelletier
1 2 3 4 5 | expr.matrix=readRDS("data/expr_matrix_LGVD.rds")
results=readRDS("data/results_LGVD.rds")
result <- results[[1]]
annotations = annotate_ensembl(rownames(expr.matrix))[[1]]
transcriptCount <- transcript_count(result,annotations)
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