annotate_ensembl: Takes an ensembl_gene_id

In spell098/rnaseq_functions2: Contain various functions for rnaseq analysis

Description

Takes an ensembl_gene_id

Usage

annotate_ensembl(IDs, type)

Arguments

IDs	All IDs (rat or human); all are ensembl_gene_id

Value

The object resultsContrast annotated with an associated color for the selected comparison

Author(s)

Simon J Pelletier

See Also

colorNumericValues

Examples

expr.matrix <- readRDS("data/expr_matrix_LGVD.rds")
IDs <- rownames(expr.matrix)
annotation1 <- annotate_ensembl(IDs)
annotations <- annotation1[[1]]
go <- annotation1[[2]]
genes_annotation_unique <- annotation1[[3]]
typeID <- annotation1[[4]]

spell098/rnaseq_functions2 documentation built on May 30, 2019, 7:57 a.m.