signifRows: Select in an expression matrix only the rows with significant...
In spell098/rnaseq_functions2: Contain various functions for rnaseq analysis

Description Usage Arguments Value Author(s) See Also Examples

Select in an expression matrix only the rows with significant elements (genes,transcripts...)

1	signifRows(expr.matrix, selectedElements)

`expr.matrix`	A matrix of standardized data. Columns = samples, rows = genes,transcripts,CpG...
`resultsSummary`	A matrix of data from every gene that is significanlty different

The significant rows of the initial expression matrix between at least two groups. Columns = samples, rows = genes,transcripts,CpG...

Simon J Pelletier

topTable results_summary

expr.matrix <- readRDS("data/expr_matrix_LGVD.rds")
results <- readRDS("data/results_LGVD.rds")
topTable3 <- readRDS("data/topTable3_LGVD.rds")
resultsSummary <- results_summary(results,topTable3)