annotation_biomart: Biomart annotation
In spell098/rnaseq_functions2: Contain various functions for rnaseq analysis
Description
Usage
Author(s)
Examples
Description
Biomart annotation
Usage
1
annotation_biomart(IDs, specie, attribute, mart)
Author(s)
Simon J Pelletier
Examples
1
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3
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5
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8
specieEnsembl <- "hsapiens_gene_ensembl"
attribute <- "affy_hg_u95av2"
gset <- getGEO("GSE12654")
exprset <- gset[[1]]
type <- "ensembl_gene_id"
expr.matrix <- exprs(exprset)
IDs <- rownames(expr.matrix)[1:10]
x<-annotation_biomart(IDs,specieEnsembl,attribute)
spell098/rnaseq_functions2 documentation built on May 30, 2019, 7:57 a.m.
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Description Usage Author(s) Examples
Description
Biomart annotation
Usage
1 | annotation_biomart(IDs, specie, attribute, mart)
|
Author(s)
Simon J Pelletier
Examples
1 2 3 4 5 6 7 8 | specieEnsembl <- "hsapiens_gene_ensembl"
attribute <- "affy_hg_u95av2"
gset <- getGEO("GSE12654")
exprset <- gset[[1]]
type <- "ensembl_gene_id"
expr.matrix <- exprs(exprset)
IDs <- rownames(expr.matrix)[1:10]
x<-annotation_biomart(IDs,specieEnsembl,attribute)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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