simpleAnova-methods: description of function simpleAnova

In stela2502/StefansExpressionSet: StefansExpressionSet

description of function simpleAnova

Description

This function calculates an annova to identify significant changes in the StefansExpressionSet

has a higher sensitivity for multi group analyses to identify group specific changes

or general trends in the dataset. This function adds the results into the stats slot

of the StefansExpressionSet object.

This function calculates an annova to identify significant changes in the StefansExpressionSet

has a higher sensitivity for multi group analyses to identify group specific changes

or general trends in the dataset. This function adds the results into the stats slot

of the SingleCellsNGS object. In contrast to the StefansExpressionSet version of the function,

the cells showing no expression are axcluded from the stats.

Usage

simpleAnova(x, groupCol = "GroupName", padjMethod = "BH")

## S4 method for signature 'SingleCellsNGS'
simpleAnova(x, groupCol = "GroupName",
  padjMethod = "BH")

Arguments

x	the StefansExpressionSet object
groupCol	the samples table column that contains the grouping information
padjMethod	the p value correction method as described in p.adjust
x	the SingleCellsNGS object
groupCol	the samples table column that contains the grouping information
padjMethod	the p value correction method as described in p.adjust

stela2502/StefansExpressionSet documentation built on April 24, 2023, 8:15 p.m.