read.csv.gr: Import csv to genomic ranges
In suvarzz/MNuc: MNuc
Description
Usage
Arguments
See Also
Description
Read csv file and return genomic ranges.
Usage
1
read.csv.gr(file, chromsizes = "sc")
Arguments
chromsizes
File containing chromosome sizes.
'sc' - Preset Saccharomyces serevisiae chromosome sizes.
CSV
file containing tab separated columns: seqname, start, end, (optional: width), strand and optional extra
columns containing metadata (e.g. genenemes, score, signal, cg). Read also csv files from .gz archives.
| seqname | start | end | strand | score |
| chrI | 100 | 200 | + | 1.5 |
See Also
suvarzz/MNuc documentation built on Aug. 11, 2019, 6:45 a.m.
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Description Usage Arguments See Also
Description
Read csv file and return genomic ranges.
Usage
1 | read.csv.gr(file, chromsizes = "sc")
|
Arguments
chromsizes |
File containing chromosome sizes. 'sc' - Preset Saccharomyces serevisiae chromosome sizes. |
CSV |
file containing tab separated columns: seqname, start, end, (optional: width), strand and optional extra columns containing metadata (e.g. genenemes, score, signal, cg). Read also csv files from .gz archives. | seqname | start | end | strand | score | | chrI | 100 | 200 | + | 1.5 | |
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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