View source: R/bamcov.plot.R View source: R/bamcov.plot2.R
Bam Coverage Statter Plot
Bam Coverage Statter Plot
1 2 3 4 5 6 7 8 9 10 11 12 13 14 | bamcov.plot(indir1 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/Et/IP",
indir2 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/IAA/IP",
outdir = "/home/suvar/Desktop/", lables = c("HU-SR 2h", "HU-SR 0'",
"HU-SR 10'", "HU-SR 20'", "HU-SR 30'", "HU-SR 40'", "HU-SR 50'",
"HU-SR 60'", "HU-SR 70'", "HU-SR 80'", "HU-SR 90'"),
filename = "BamCoverage_plot.png", log = FALSE)
bamcov.plot(indir1 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/Et/IP",
indir2 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/IAA/IP",
outdir = "/home/suvar/Desktop/", lables = c("HU-SR 2h", "HU-SR 0'",
"HU-SR 10'", "HU-SR 20'", "HU-SR 30'", "HU-SR 40'", "HU-SR 50'",
"HU-SR 60'", "HU-SR 70'", "HU-SR 80'", "HU-SR 90'"),
filename = "BamCoverage_plot.png", log = FALSE)
|
outdir |
Output directory |
indir |
Directory containing bam coverage binned bedgraph files |
indir |
Directory containing bam coverage binned bedgraph files |
outdir |
Output directory |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.