bamcov.plot: Bam Coverage Statter Plot
In suvarzz/MNuc: MNuc
View source: R/bamcov.plot.R
View source: R/bamcov.plot2.R
Description
Bam Coverage Statter Plot
Bam Coverage Statter Plot
Usage
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bamcov.plot(indir1 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/Et/IP",
indir2 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/IAA/IP",
outdir = "/home/suvar/Desktop/", lables = c("HU-SR 2h", "HU-SR 0'",
"HU-SR 10'", "HU-SR 20'", "HU-SR 30'", "HU-SR 40'", "HU-SR 50'",
"HU-SR 60'", "HU-SR 70'", "HU-SR 80'", "HU-SR 90'"),
filename = "BamCoverage_plot.png", log = FALSE)
bamcov.plot(indir1 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/Et/IP",
indir2 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/IAA/IP",
outdir = "/home/suvar/Desktop/", lables = c("HU-SR 2h", "HU-SR 0'",
"HU-SR 10'", "HU-SR 20'", "HU-SR 30'", "HU-SR 40'", "HU-SR 50'",
"HU-SR 60'", "HU-SR 70'", "HU-SR 80'", "HU-SR 90'"),
filename = "BamCoverage_plot.png", log = FALSE)
Arguments
outdir
Output directory
indir
Directory containing bam coverage binned bedgraph files
indir
Directory containing bam coverage binned bedgraph files
outdir
Output directory
suvarzz/MNuc documentation built on Aug. 11, 2019, 6:45 a.m.
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View source: R/bamcov.plot.R View source: R/bamcov.plot2.R
Description
Bam Coverage Statter Plot
Bam Coverage Statter Plot
Usage
1 2 3 4 5 6 7 8 9 10 11 12 13 14 | bamcov.plot(indir1 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/Et/IP",
indir2 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/IAA/IP",
outdir = "/home/suvar/Desktop/", lables = c("HU-SR 2h", "HU-SR 0'",
"HU-SR 10'", "HU-SR 20'", "HU-SR 30'", "HU-SR 40'", "HU-SR 50'",
"HU-SR 60'", "HU-SR 70'", "HU-SR 80'", "HU-SR 90'"),
filename = "BamCoverage_plot.png", log = FALSE)
bamcov.plot(indir1 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/Et/IP",
indir2 = "/home/suvar/Projects/007_ChIPseq_HU-SR/output/bam_cov/IAA/IP",
outdir = "/home/suvar/Desktop/", lables = c("HU-SR 2h", "HU-SR 0'",
"HU-SR 10'", "HU-SR 20'", "HU-SR 30'", "HU-SR 40'", "HU-SR 50'",
"HU-SR 60'", "HU-SR 70'", "HU-SR 80'", "HU-SR 90'"),
filename = "BamCoverage_plot.png", log = FALSE)
|
Arguments
outdir |
Output directory |
indir |
Directory containing bam coverage binned bedgraph files |
indir |
Directory containing bam coverage binned bedgraph files |
outdir |
Output directory |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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