Files in thierrygosselin/assigner
Assignment Analysis with RADseq Data
.DS_Store
.Rbuildignore
.github/.gitignore
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/R-CMD-check.yaml
.gitignore
.travis.yml
DESCRIPTION
FEATURES.md
LICENSE.md
NAMESPACE
NEWS.md
R/assigner_dots.R
R/assignment_ngs.R
R/data.R
R/dlr.R
R/fst_NEI87.R
R/fst_WC84.R
R/global_variables.R
R/utils.R
README.Rmd
README.md
_pkgdown.yml
assigner.Rproj
cran-comments.md
data/data_assigner_sim_01.rda
data/data_assigner_sim_02.rda
docs/FEATURES.html
docs/LICENSE.html
docs/apple-touch-icon-120x120.png
docs/apple-touch-icon-152x152.png
docs/apple-touch-icon-180x180.png
docs/apple-touch-icon-60x60.png
docs/apple-touch-icon-76x76.png
docs/apple-touch-icon.png
docs/articles/assigner_fst_tree_example.png
docs/articles/assignment.whitelists.html
docs/articles/assignment_loo_test4.png
docs/articles/assignment_thl_test1.png
docs/articles/assignment_thl_test1_full_range.png
docs/articles/assignment_thl_test2.png
docs/articles/assignment_thl_test3.png
docs/articles/fst_WC84_heatmap_fst.png
docs/articles/fst_confidence_intervals.html
docs/articles/get_started.html
docs/articles/index.html
docs/articles/life_cycle.html
docs/articles/rad_genomics_computer_setup.html
docs/articles/web_only/fst_comparisons.html
docs/articles/web_only/fst_comparisons_files/figure-html/plot the results-1.png
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/favicon-16x16.png
docs/favicon-32x32.png
docs/favicon.ico
docs/index.html
docs/link.svg
docs/logo.png
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Exposition_pipe_operator.html
docs/reference/assigner_parallel.html
docs/reference/assigner_stats.html
docs/reference/assignment_adegenet.html
docs/reference/assignment_gsi_sim.html
docs/reference/assignment_marker_loop.html
docs/reference/assignment_ngs.html
docs/reference/assignment_random.html
docs/reference/assignment_ranking.html
docs/reference/assignment_subsamples.html
docs/reference/boot_ci.html
docs/reference/boot_ci_nei.html
docs/reference/clean_marker_number.html
docs/reference/compound_assignment_pipe_operator.html
docs/reference/compute_fst.html
docs/reference/compute_fst_nei.html
docs/reference/data_assigner_sim_01.html
docs/reference/data_assigner_sim_02.html
docs/reference/dlr.html
docs/reference/dlr_relative.html
docs/reference/figures/logo.png
docs/reference/fst_NEI87.html
docs/reference/fst_WC84.html
docs/reference/fst_nei_subsample.html
docs/reference/fst_subsample.html
docs/reference/generate_holdhout.html
docs/reference/generate_subsamples.html
docs/reference/gsi_sim_binary.html
docs/reference/gsi_sim_binary_path.html
docs/reference/gsi_sim_exists.html
docs/reference/gsi_sim_is_executable.html
docs/reference/heatmap_fst.html
docs/reference/import_subsamples.html
docs/reference/import_subsamples_fst.html
docs/reference/index.html
docs/reference/install_gsi_sim.html
docs/reference/marker_selection.html
docs/reference/n.html
docs/reference/pairwise_fst.html
docs/reference/pairwise_fst_nei.html
docs/reference/pipe.html
docs/reference/plot_assignment.html
docs/reference/plot_dlr.html
docs/reference/subsampling_data.html
inst/CITATION
man/.Rapp.history
man/Exposition_pipe_operator.Rd
man/assign_defaults.Rd
man/assigner_dots.Rd
man/assigner_fst_stats.Rd
man/assigner_function_header.Rd
man/assigner_future.Rd
man/assigner_stats.Rd
man/assigner_tic.Rd
man/assigner_toc.Rd
man/assignment_adegenet.Rd
man/assignment_gsi_sim.Rd
man/assignment_marker_loop.Rd
man/assignment_ngs.Rd
man/assignment_random.Rd
man/assignment_ranking.Rd
man/assignment_subsamples.Rd
man/boot_ci.Rd
man/boot_ci_nei.Rd
man/change_matrix_strata.Rd
man/check_args_class.Rd
man/clean_marker_number.Rd
man/compound_assignment_pipe_operator.Rd
man/compute_fst.Rd
man/compute_fst_nei.Rd
man/data_assigner_sim_01.Rd
man/data_assigner_sim_02.Rd
man/dlr.Rd
man/dlr_relative.Rd
man/extract_dots.Rd
man/figures/logo.png
man/fst_NEI87.Rd
man/fst_WC84.Rd
man/fst_nei_subsample.Rd
man/fst_stats.Rd
man/fst_subsample.Rd
man/fst_write.Rd
man/generate_holdhout.Rd
man/generate_subsamples.Rd
man/gsi_sim_binary.Rd
man/gsi_sim_binary_path.Rd
man/gsi_sim_exists.Rd
man/gsi_sim_is_executable.Rd
man/heatmap_fst.Rd
man/import_subsamples.Rd
man/import_subsamples_fst.Rd
man/install_gsi_sim.Rd
man/marker_selection.Rd
man/match_markers_meta.Rd
man/message_func_call.Rd
man/n.Rd
man/pairwise_fst.Rd
man/pairwise_fst_nei.Rd
man/parallel_core_opt.Rd
man/pipe.Rd
man/plot_assignment.Rd
man/plot_dlr.Rd
man/rad_long.Rd
man/rad_wide.Rd
man/subsampling_data.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
vignettes/.DS_Store
vignettes/.gitignore
vignettes/assigner_fst_tree_example.png
vignettes/assignment.whitelists.Rmd
vignettes/assignment.whitelists.html
vignettes/assignment_loo_test4.png
vignettes/assignment_thl_test1.png
vignettes/assignment_thl_test1_full_range.png
vignettes/assignment_thl_test2.png
vignettes/assignment_thl_test3.png
vignettes/automator.png
vignettes/copy_path.png
vignettes/fst_WC84_heatmap_fst.png
vignettes/fst_confidence_intervals.Rmd
vignettes/fst_confidence_intervals.html
vignettes/get_started.Rmd
vignettes/life_cycle.Rmd
vignettes/membership_dataset1.png
vignettes/membership_dataset2.png
vignettes/rad_genomics_computer_setup.Rmd
vignettes/rad_genomics_computer_setup.html
vignettes/terminal_folder_shortcut.png
vignettes/web_only/fst.summary.sim01.tsv
vignettes/web_only/fst.summary.sim02.tsv
vignettes/web_only/fst.summary.tsv
vignettes/web_only/fst_comparisons.Rmd
vignettes/web_only/fst_comparisons_packages_features.tsv
