getNbPCsMinimAvgSqPartCor: Choose the number of PCs
In timflutre/rutilstimflutre: Timothee Flutre's personal R code
getNbPCsMinimAvgSqPartCor R Documentation
Choose the number of PCs
Description
Return the number of PCs that minimizes the average squared partial correlation, from Shriner (Heredity, 2011).
Usage
getNbPCsMinimAvgSqPartCor(X)
Arguments
X
matrix (e.g. genotypes in 0,1,2 with SNPs in rows and individuals in columns)
Value
integer
Author(s)
Daniel Shriner [aut], Timothee Flutre [cre]
timflutre/rutilstimflutre documentation built on Feb. 7, 2024, 8:17 a.m.
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| getNbPCsMinimAvgSqPartCor | R Documentation |
Choose the number of PCs
Description
Return the number of PCs that minimizes the average squared partial correlation, from Shriner (Heredity, 2011).
Usage
getNbPCsMinimAvgSqPartCor(X)
Arguments
X |
matrix (e.g. genotypes in 0,1,2 with SNPs in rows and individuals in columns) |
Value
integer
Author(s)
Daniel Shriner [aut], Timothee Flutre [cre]
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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