timoast/signac: Analysis of Single-Cell Chromatin Data

A framework for the analysis and exploration of single-cell chromatin data. The 'Signac' package contains functions for quantifying single-cell chromatin data, computing per-cell quality control metrics, dimension reduction and normalization, visualization, and DNA sequence motif analysis. Reference: Stuart and Butler et al. (2019) <doi:10.1016/j.cell.2019.05.031>.

Getting started

Package details

LicenseMIT + file LICENSE
URL https://github.com/timoast/signac https://satijalab.org/signac
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
timoast/signac documentation built on Aug. 13, 2020, 5:19 p.m.